6G6P
Crystal structure of the computationally designed Ika8 protein: crystal packing No.2 in P63
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-26 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 63 |
Unit cell lengths | 127.374, 127.374, 53.869 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.405 - 2.400 |
R-factor | 0.2139 |
Rwork | 0.211 |
R-free | 0.26310 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.599 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.410 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Rpim | 0.018 | 0.245 |
Number of reflections | 19765 | |
<I/σ(I)> | 19.9 | 3.3 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 20.1 | 20.4 |
CC(1/2) | 0.999 | 0.910 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6 | 293.15 | 0.1M MES pH6.0, 1.0M LiCl, 20% (w/v) PEG6000 |