6G50
The structure of thiocyanate dehydrogenase from Thioalkalivibrio paradoxus as isolated.
Replaces: 5F30Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID29 |
| Synchrotron site | ESRF |
| Beamline | ID29 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-02-17 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.98400 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 90.630, 162.280, 90.570 |
| Unit cell angles | 90.00, 119.51, 90.00 |
Refinement procedure
| Resolution | 45.310 - 1.650 |
| R-factor | 0.14699 |
| Rwork | 0.143 |
| R-free | 0.20716 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5F30 |
| RMSD bond length | 0.016 |
| RMSD bond angle | 1.901 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.400 | 1.700 |
| High resolution limit [Å] | 1.650 | 1.650 |
| Rmeas | 0.098 | 0.790 |
| Number of reflections | 691361 | 22515 |
| <I/σ(I)> | 9.2 | 1.65 |
| Completeness [%] | 97.3 | 96.8 |
| Redundancy | 2.6 | |
| CC(1/2) | 0.996 | 0.510 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 290 | PRECIPITANT SOLUTION: 0.2 M lithium sulfate, 0.1 M BIS-TRIS, pH 5.5, 25% w/v PEG 3350. Protein solution: TcDH 10 mg/ml 25 mM borate, pH 9.5 |






