6G42
Crystal structure of mavirus penton protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-29 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 95.240, 131.100, 154.210 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.860 - 2.700 |
R-factor | 0.2229 |
Rwork | 0.220 |
R-free | 0.27310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6g41 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.168 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.860 | 47.860 | 2.800 |
High resolution limit [Å] | 2.700 | 10.000 | 2.700 |
Rmerge | 0.085 | 0.037 | 0.721 |
Rmeas | 0.093 | 0.041 | 0.783 |
Number of reflections | 53606 | 1168 | 5446 |
<I/σ(I)> | 16.22 | 40.11 | 3.08 |
Completeness [%] | 99.8 | 98.5 | 99.6 |
Redundancy | 6.68 | 5.871 | 6.672 |
CC(1/2) | 0.997 | 0.996 | 0.883 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.1 M Tris, 0.3 M NaCl, 26% PEG3350 |