6FNZ
Crystal Structure of domain-swapped C-terminal domain of human doublecortin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-12 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.000000 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 98.450, 98.450, 114.810 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.028 - 2.230 |
R-factor | 0.2088 |
Rwork | 0.207 |
R-free | 0.23130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | modified PDB entry 5ip4 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.922 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.12rc1_2801) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.028 | 44.028 | 2.230 |
High resolution limit [Å] | 2.180 | 9.730 | 2.180 |
Rmerge | 0.086 | 0.029 | 4.769 |
Rmeas | 0.092 | 0.031 | 5.469 |
Total number of observations | 244277 | ||
Number of reflections | 29591 | 416 | 1456 |
<I/σ(I)> | 12.86 | 39.31 | 0.27 |
Completeness [%] | 97.5 | 97.7 | 66.5 |
Redundancy | 8.26 | 6.591 | 3.909 |
CC(1/2) | 0.999 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.3 | 293 | 20 mg/mL protein and 3x cmc CHAPS in 20mM CAPS/NaOH pH10.5, 100mM NaCl, 5mM TCEP mixed 60-70% with 40-30% reservoir consisting of 0.1M HEPES/NaOH pH7.0, 10% PEG 5000 MME, 5% Tacsimate |