6FNX
FIRST DOMAIN OF HUMAN BROMODOMAIN BRD4 IN COMPLEX WITH INHIBITOR F1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE MASSIF-1 |
| Synchrotron site | ESRF |
| Beamline | MASSIF-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-02-12 |
| Detector | DECTRIS PILATUS3 2M |
| Wavelength(s) | 0.966 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 37.863, 44.175, 78.156 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.080 - 1.190 |
| R-factor | 0.23407 |
| Rwork | 0.232 |
| R-free | 0.27634 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2oss |
| RMSD bond length | 0.034 |
| RMSD bond angle | 2.840 |
| Data reduction software | XDS (0.53) |
| Data scaling software | XDS (0.53) |
| Phasing software | PHASER (2.6.1) |
| Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 39.080 | 1.230 |
| High resolution limit [Å] | 1.190 | 1.190 |
| Rmerge | 0.102 | 0.772 |
| Rmeas | 0.116 | 0.880 |
| Rpim | 0.053 | 0.414 |
| Number of reflections | 41897 | 4061 |
| <I/σ(I)> | 8.27 | 1.63 |
| Completeness [%] | 98.4 | 97.55 |
| Redundancy | 4.5 | 4.3 |
| CC(1/2) | 0.996 | 0.643 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | EVAPORATION | 292 | 5mM of #F1 inhibitor (in DMSO) final concentration. Ratio 1:1 (protein:precipitant). 20mg/mL of BRD4(BD1) protein. 0.25M AmSO4; 0.1M NaCl; 0,1M Tris pH 8.5; 19% (w/v) PEG3350. Cryoprotectant: 10 % (w/v) ethylene glycol. |






