6FMG
Structure of the Mannose Transporter IIA Domain from Streptococcus pneumoniae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-27 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 63 |
Unit cell lengths | 138.528, 138.528, 69.767 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 26.179 - 1.800 |
R-factor | 0.1716 |
Rwork | 0.170 |
R-free | 0.19650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1pdo |
RMSD bond length | 0.011 |
RMSD bond angle | 1.088 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.150 | 1.900 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.147 | 2.052 |
Number of reflections | 1461081 | |
<I/σ(I)> | 14.5 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 20.6 | 10.5 |
CC(1/2) | 0.999 | 0.666 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M Magnesium acetate tetrahydrate 0.1 M Sodium cacodylate 6.5 20 % w/v PEG 8000 |