6FLY
Structure of AcmJRL, a mannose binding jacalin related lectin from Ananas comosus, in complex with mannose.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-03-23 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 86.680, 86.680, 257.270 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.842 - 2.749 |
R-factor | 0.1889 |
Rwork | 0.187 |
R-free | 0.22110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6flw |
RMSD bond length | 0.004 |
RMSD bond angle | 0.981 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10_2152: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.842 | 2.920 |
High resolution limit [Å] | 2.749 | 2.749 |
Rmerge | 0.196 | 1.270 |
Number of reflections | 28132 | |
<I/σ(I)> | 13.2 | 2 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 12.4 | 12.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 4M sodium nitrate, 0.1 M Tris-HCl pH 8.5; protein solution 17mg/ml in H2O |