6FJQ
Adenovirus species 48, fiber knob protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-12 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 43 3 2 |
Unit cell lengths | 145.205, 145.205, 145.205 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 83.830 - 2.910 |
R-factor | 0.20525 |
Rwork | 0.201 |
R-free | 0.29134 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1knb |
RMSD bond length | 0.019 |
RMSD bond angle | 2.293 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 83.820 | 2.990 |
High resolution limit [Å] | 2.910 | 2.910 |
Rmerge | 0.125 | 3.026 |
Rmeas | 0.127 | 3.063 |
Number of reflections | 12061 | 877 |
<I/σ(I)> | 22.2 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 41.2 | 41.4 |
CC(1/2) | 1.000 | 0.705 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1 M Bis-Tris-propane, 20% PEG 3350, 0.2M NaNO3 |