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6FIQ

DDR1, 1-(1H-indazole-5-carbonyl)-5'-methoxy-1'-[2-oxo-2-[(2S)-2-(trifluoromethyl)pyrrolidin-1-yl]ethyl]spiro[piperidine-4,3'-pyrrolo[3,2-b]pyridine]-2'-one, 1.790A, P212121, Rfree=23.8%

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2015-09-04
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.00000
Spacegroup nameP 21 21 21
Unit cell lengths59.934, 71.668, 72.644
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.231 - 1.790
R-factor0.2011
Rwork0.199
R-free0.23780
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.007
RMSD bond angle1.013
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (dev_2067)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.2301.890
High resolution limit [Å]1.7901.790
Rmerge0.0860.949
Rmeas0.1030.037
Total number of observations217022
Number of reflections30156406
<I/σ(I)>10.080.74
Completeness [%]99.899.5
Redundancy7.247.03
CC(1/2)0.9990.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529311.3 mg/mL protein in 20mM HEPES/NaOH pH7.5, 5mM DTT, 5% glycerol, 0.1M NaCl mixed 1.3:1 with 90mM MES/NaOH pH6.5, 0.18M potassium iodide, 0.2M Li2SO4, 22.5% PEG 4K

219869

PDB entries from 2024-05-15

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