6FGF
Crystal Structure of BAZ2A bromodomain in complex with 1-methylpyridinone compound 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-05 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.00 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 95.339, 95.339, 32.546 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.283 - 2.801 |
R-factor | 0.2207 |
Rwork | 0.219 |
R-free | 0.25620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5mgj |
RMSD bond length | 0.003 |
RMSD bond angle | 0.600 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.670 | 47.670 | 2.950 |
High resolution limit [Å] | 2.800 | 8.860 | 2.800 |
Rmerge | 0.335 | 0.143 | 1.081 |
Rmeas | 0.363 | 0.155 | 1.177 |
Rpim | 0.138 | 0.059 | 0.457 |
Number of reflections | 4348 | 157 | 632 |
<I/σ(I)> | 4.9 | ||
Completeness [%] | 100.0 | 99 | 100 |
Redundancy | 6.7 | 6.6 | 6.4 |
CC(1/2) | 0.969 | 0.991 | 0.588 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 20% PEG3350, 0.2 M MgCl2 |