6FFJ
Anti-tumor antibody 14F7-derived single chain fragment variable (scFv)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID29 |
| Synchrotron site | ESRF |
| Beamline | ID29 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-02-05 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 1.0332 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 63.798, 119.066, 68.286 |
| Unit cell angles | 90.00, 90.22, 90.00 |
Refinement procedure
| Resolution | 46.708 - 2.200 |
| R-factor | 0.1865 |
| Rwork | 0.184 |
| R-free | 0.23840 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3umt |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.065 |
| Data reduction software | XDS |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.710 | 2.280 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.112 | 0.532 |
| Rmeas | 0.137 | 0.653 |
| Rpim | 0.078 | 0.374 |
| Number of reflections | 49026 | 4880 |
| <I/σ(I)> | 3.4 | 1.2 |
| Completeness [%] | 94.8 | 96.4 |
| Redundancy | 2.5 | 2.5 |
| CC(1/2) | 0.989 | 0.800 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 12.5 % w/v PEG 1000, 12.5 % w/v PEG 3350, 12.5 % v/v MPD, 0.02 M 1,6-hexandiol, 0.02 M 1-butanol, 0.02 M (RS)-1,2-propanediol, 0.02 M 2-propanol, 0.02 M 1,4-butanediol, 0.02 M 1,3-propanediol, 0.1 M bicine/tris base pH 8.5 |






