6FDB
Positively supercharged variant of the computationally designed cage protein O3-33
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-12-04 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | H 3 2 |
Unit cell lengths | 136.865, 136.865, 559.097 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.594 - 3.619 |
R-factor | 0.2285 |
Rwork | 0.225 |
R-free | 0.28770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3vcd |
RMSD bond length | 0.003 |
RMSD bond angle | 0.598 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.840 |
High resolution limit [Å] | 3.619 | 3.619 |
Rmerge | 0.308 | 1.892 |
Number of reflections | 44350 | 6952 |
<I/σ(I)> | 5.3 | 0.89 |
Completeness [%] | 99.5 | 97.4 |
Redundancy | 6 | |
CC(1/2) | 0.989 | 0.341 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 2 M (NH4)2SO4, 5% 2-propanol |