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6F6Y

Crystal structure of galectin-3 CRD in complex with galactopentaose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX II BEAMLINE I911-3
Synchrotron siteMAX II
BeamlineI911-3
Temperature [K]100
Detector technologyCCD
Collection date2013-10-15
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.0000
Spacegroup nameP 21 21 21
Unit cell lengths36.060, 58.200, 62.990
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution27.699 - 1.410
R-factor0.1183
Rwork0.116
R-free0.15330
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)3zsk
RMSD bond length0.005
RMSD bond angle1.240
Data reduction softwareXDS
Data scaling softwareXSCALE
Refinement softwarePHENIX (1.8.3_1479)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.7001.490
High resolution limit [Å]1.4101.410
Rmerge0.0530.351
Number of reflections25876
<I/σ(I)>19.8
Completeness [%]98.290.2
Redundancy5.94.2
CC(1/2)0.9990.885
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529319 mg/ml Gal3C in 10 mM sodium phosphate buffer pH 7.5, 100 mM NaCl, 10 mM beta-mercaptoethanol, 0.02 % NaN3. 3.5 microlitres Gal3C were mixed with 3.5 microlitres 100 mM galactopentaose solution and incubated on ice for one hour. Crystals were obtained in 30% w/v PEG 4000, 0.1 M Tris/HCl pH 7.5, 0.1M MgCl2, 0.4M NaSCN, 8 mM beta-mercaptoethanol. Cryoprotectant contained an additional 11% glycerol.

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