6F5X
Crystal structure of the SYCP1 N-terminal head-to-head assembly in closed conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-05-23 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.7712 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 28.640, 39.380, 165.770 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.440 - 1.910 |
R-factor | 0.2278 |
Rwork | 0.227 |
R-free | 0.23920 |
Structure solution method | SAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.022 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.440 | 1.950 |
High resolution limit [Å] | 1.910 | 1.910 |
Rmerge | 0.028 | 0.678 |
Rmeas | 0.036 | 0.873 |
Rpim | 0.017 | 0.541 |
Number of reflections | 7678 | 464 |
<I/σ(I)> | 27.9 | 1.8 |
Completeness [%] | 99.3 | 92.1 |
Redundancy | 5.9 | 3.7 |
CC(1/2) | 1.000 | 0.839 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 293 | 140 mM NaCl, 70 mM Na/K phosphate pH 6.2, 35% (v/v) PEG200; soaked in 40% (v/v) PEG200 and 100 mM NaI |