6F5N
Nickel-Bound Crystal Structure of a GB1 Variant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-29 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 26.680, 59.328, 75.729 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.700 - 2.200 |
R-factor | 0.2666 |
Rwork | 0.257 |
R-free | 0.35580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1igd |
RMSD bond length | 0.013 |
RMSD bond angle | 1.238 |
Data reduction software | ADDREF |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.700 | 2.330 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmeas | 0.135 | 0.810 |
Number of reflections | 49277 | 997 |
<I/σ(I)> | 8.2 | 2.35 |
Completeness [%] | 99.4 | 96.9 |
Redundancy | 7.5 | |
CC(1/2) | 0.990 | 0.970 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | 50 mM nickel (II) chloride hexahydrate, 0.1 M Tris, 20 % w/v PEG 4000, pH 8.5. |