6F5B
Structure of ARTD2/PARP2 WGR domain bound to double stranded DNA with 5'phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-21 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 63.160, 84.360, 95.960 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.800 |
R-factor | 0.21127 |
Rwork | 0.208 |
R-free | 0.27392 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PARP2 homology model |
RMSD bond length | 0.010 |
RMSD bond angle | 1.600 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.930 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.010 | 1.797 |
Rmeas | 0.021 | |
Number of reflections | 13124 | |
<I/σ(I)> | 11.36 | |
Completeness [%] | 99.8 | |
Redundancy | 4.77 | |
CC(1/2) | 1.000 | 0.400 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 277 | 12 % v/v Polypropylene glycol 400 0.1 M Na-acetate 3 % 2 propanol |