6F48
Structure of quinolinate synthase with reaction intermediates X and Y
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-3 |
Synchrotron site | ESRF |
Beamline | MASSIF-3 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-09 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.96770 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.500, 48.950, 61.250 |
Unit cell angles | 90.00, 107.27, 90.00 |
Refinement procedure
Resolution | 37.500 - 1.500 |
R-factor | 0.1365 |
Rwork | 0.134 |
R-free | 0.17890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4p3x |
RMSD bond length | 0.011 |
RMSD bond angle | 1.497 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.27) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.540 | 37.540 | 1.550 |
High resolution limit [Å] | 1.500 | 5.810 | 1.500 |
Rmerge | 0.052 | 0.034 | 0.907 |
Rmeas | 0.059 | 0.039 | 1.032 |
Rpim | 0.028 | 0.020 | 0.488 |
Number of reflections | 49728 | 876 | 4844 |
<I/σ(I)> | 16.8 | ||
Completeness [%] | 98.8 | 94.5 | 99.3 |
Redundancy | 4.4 | 4 | 4.4 |
CC(1/2) | 0.998 | 0.999 | 0.719 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.1 | 298 | PEG33500, ammonium sulfate, oxaloacetate, DHAP, NaF, Bis Tris propane, anaerobic |