6E7O
Crystal structure of deglycosylated human EPDR1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | CLSI BEAMLINE 08ID-1 |
| Synchrotron site | CLSI |
| Beamline | 08ID-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-12-01 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.9793 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 87.805, 97.482, 189.469 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 61.687 - 3.000 |
| R-factor | 0.2557 |
| Rwork | 0.255 |
| R-free | 0.27810 |
| Structure solution method | SAD |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.884 |
| Data reduction software | HKL-2000 |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.14_3211)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 61.700 | 3.100 |
| High resolution limit [Å] | 3.000 | 3.000 |
| Number of reflections | 17638 | |
| <I/σ(I)> | 15.7 | 1.9 |
| Completeness [%] | 99.9 | |
| Redundancy | 8.3 | 8.4 |
| CC(1/2) | 0.998 | 0.714 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M lithium sulfate, 0.1 M sodium acetate pH 4.5, 30% PEG8000, 4% propanediol |






