6E45
CRYSTAL STRUCTURE OF HUMAN INDOLEAMINE 2,3-DIOXYGENASE 1 (IDO1) free enzyme in the ferrous state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-2 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 79.969, 196.538, 116.207 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.878 - 2.000 |
R-factor | 0.1891 |
Rwork | 0.189 |
R-free | 0.22580 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.047 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 65.878 | 65.878 | 2.120 |
High resolution limit [Å] | 2.000 | 5.970 | 2.000 |
Rmerge | 0.094 | 0.032 | 0.802 |
Rmeas | 0.105 | 0.037 | 0.901 |
Total number of observations | 613205 | ||
Number of reflections | 123961 | 5006 | 19273 |
<I/σ(I)> | 10.55 | 30.77 | 1.88 |
Completeness [%] | 99.4 | 99.6 | 96.8 |
Redundancy | 4.947 | 4.758 | 4.825 |
CC(1/2) | 0.998 | 0.999 | 0.790 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.2 | 298 | 0.1 M phosphate (pH 6.2), and 15% (w/v) PEG3350 |