6E44
CRYSTAL STRUCTURE OF HUMAN INDOLEAMINE 2,3-DIOXYGENASE 1 (IDO1) free enzyme in the ferric state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-20 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9792 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 80.082, 196.995, 116.242 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.038 - 1.903 |
R-factor | 0.1947 |
Rwork | 0.194 |
R-free | 0.23470 |
RMSD bond length | 0.011 |
RMSD bond angle | 0.980 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.038 | 47.038 | 2.020 |
High resolution limit [Å] | 1.900 | 5.670 | 1.900 |
Rmerge | 0.060 | 0.024 | 0.636 |
Rmeas | 0.071 | 0.028 | 0.742 |
Total number of observations | 533366 | ||
Number of reflections | 143553 | 5728 | 22833 |
<I/σ(I)> | 12.26 | 34.18 | 1.86 |
Completeness [%] | 99.4 | 98.4 | 98.9 |
Redundancy | 3.715 | 3.54 | 3.798 |
CC(1/2) | 0.999 | 0.999 | 0.817 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 6.2 | 298 | 0.1 M phosphate (pH 6.2), and 15% (w/v) PEG3350 |