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6DYU

Crystal structure of Helicobacter pylori 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN) complexed with (3R,4S)-1-((4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl)-4-((prop-2-yn-1-ylthio)methyl)pyrrolidin-3-ol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2017-11-07
DetectorRAYONIX MX225HE
Wavelength(s)0.97931
Spacegroup nameP 41 21 2
Unit cell lengths73.255, 73.255, 176.142
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution67.640 - 1.600
R-factor0.16579
Rwork0.164
R-free0.19342
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4wkp
RMSD bond length0.009
RMSD bond angle1.473
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]67.6401.630
High resolution limit [Å]1.6001.600
Number of reflections64250
<I/σ(I)>13
Completeness [%]100.0
Redundancy14.4
CC(1/2)0.9990.698
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP295200 mM sodium nitrate, 20% w/v PEG3350

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