Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DYE

Fe(II)-bound structure of the engineered cyt cb562 variant, CH3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsBRUKER AXS MICROSTAR
Temperature [K]100
Detector technologyCCD
Collection date2017-10-06
DetectorAPEX II CCD
Wavelength(s)1.38
Spacegroup nameP 1 21 1
Unit cell lengths32.994, 82.687, 38.779
Unit cell angles90.00, 100.39, 90.00
Refinement procedure
Resolution32.450 - 2.250
R-factor0.2015
Rwork0.198
R-free0.26980
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2bc5
RMSD bond length0.008
RMSD bond angle1.025
Data reduction softwareSAINT
Data scaling softwareSADABS
Phasing softwarePHASER
Refinement softwarePHENIX ((1.12_2829: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.4502.331
High resolution limit [Å]2.2502.250
Rmerge0.0660.158
Number of reflections9680902
<I/σ(I)>20.086.7
Completeness [%]98.793
Redundancy6.353.09
CC(1/2)0.9400.869
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293Drop consists of 2 uL of 25% PEG 1500, 200 mM Magnesium Chloride and 0.1 M Bis-Tris (pH 6.5) mixed with 2 uL of 3 mM protein and 2 mM Iron(II) Sulfate (Anaerobic crystal growth)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon