Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DY4

Fe(II)-bound structure of the engineered cyt cb562 variant, CH2E

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2017-12-01
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths35.570, 48.370, 116.721
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution37.240 - 1.900
R-factor0.1913
Rwork0.184
R-free0.25440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2bc5
RMSD bond length0.010
RMSD bond angle0.928
Data reduction softwareMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]37.2401.956
High resolution limit [Å]1.9001.900
Rmerge0.0890.330
Number of reflections165201614
<I/σ(I)>11.4
Completeness [%]99.799.3
Redundancy55
CC(1/2)0.9900.923
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5293Drop consists of 2 uL of 25% PEG 1500, and 0.1 M Tris (pH 8.5) mixed with 2 uL of 4 mM protein and 2.5 mM Iron(II) Sulfate (Anaerobic crystal growth)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon