6DXF
Crystal structure of chalcone synthase from Selaginella moellendorffii - hydrogen peroxide treated
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-03-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979400 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.540, 67.064, 102.993 |
Unit cell angles | 90.00, 91.72, 90.00 |
Refinement procedure
Resolution | 102.947 - 1.550 |
R-factor | 0.1547 |
Rwork | 0.153 |
R-free | 0.18250 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.246 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 102.947 | 1.605 |
High resolution limit [Å] | 1.550 | 1.550 |
Rmerge | 0.089 | 0.825 |
Rmeas | 0.105 | 0.977 |
Rpim | 0.054 | 0.513 |
Number of reflections | 108309 | 10712 |
<I/σ(I)> | 11.08 | 1.66 |
Completeness [%] | 98.7 | 98.24 |
Redundancy | 3.7 | 3.5 |
CC(1/2) | 0.999 | 0.532 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.6 | 277 | 0.1 M MOPSO (pH 6.6), 0.3 M Mg(NO3)2, 19% (v/v) PEG 4000, and 5 mM DTT. H2O2 soaking was performed by adding hydrogen peroxide to 1 mM to the cryoprotection solution (17% glycerol and 83% reservoir solution) and incubating at 277 K for 75 min |