6DWJ
SAMHD1 Bound to Vidarabine-TP in the Catalytic Pocket
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-01-24 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.92014 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 86.862, 146.724, 99.594 |
Unit cell angles | 90.00, 114.45, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.500 |
R-factor | 0.17701 |
Rwork | 0.175 |
R-free | 0.20792 |
RMSD bond length | 0.019 |
RMSD bond angle | 2.034 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.107 | 0.737 |
Number of reflections | 75598 | 3796 |
<I/σ(I)> | 10 | |
Completeness [%] | 97.4 | 97.1 |
Redundancy | 3.5 | 3.3 |
CC(1/2) | 0.989 | 0.688 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 298 | 100 MM BIS-TRIS PH 6.7 AND 25% (W/V) PEG1500 |