6DNT
UDP-N-acetylglucosamine 4-epimerase from Methanobrevibacter ruminantium M1 in complex with UDP-N-acetylmuramic acid
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-11-09 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.95370 |
| Spacegroup name | P 31 2 1 |
| Unit cell lengths | 89.497, 89.497, 82.717 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 41.360 - 1.660 |
| R-factor | 0.1527 |
| Rwork | 0.152 |
| R-free | 0.17170 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3ru7 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.389 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.28) |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 41.360 | 1.680 |
| High resolution limit [Å] | 1.650 | 1.650 |
| Rmerge | 0.091 | 0.773 |
| Rmeas | 0.095 | 0.815 |
| Rpim | 0.026 | 0.248 |
| Number of reflections | 45299 | 1292 |
| <I/σ(I)> | 22.6 | |
| Completeness [%] | 97.8 | 56.9 |
| Redundancy | 12.9 | 10.4 |
| CC(1/2) | 0.999 | 0.736 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.9 | 294 | 0.2 M NaCl, 0.1 M Bis-Tris pH 5.9 and 25% (w/v) PEG 3350 |






