6DKM
DHD131
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-05-02 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.977017 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 39.199, 74.709, 105.257 |
Unit cell angles | 90.00, 92.75, 90.00 |
Refinement procedure
Resolution | 42.990 - 2.380 |
R-factor | 0.2443 |
Rwork | 0.241 |
R-free | 0.28320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Computational design model |
RMSD bond length | 0.002 |
RMSD bond angle | 0.446 |
Data reduction software | XDS (June 17, 2015) |
Data scaling software | XDS (June 17, 2015) |
Phasing software | PHASER (2.8.0.) |
Refinement software | PHENIX ((dev_3112: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.990 | 2.470 |
High resolution limit [Å] | 2.380 | 2.380 |
Rmerge | 0.180 | 1.560 |
Rmeas | 0.207 | 1.794 |
Rpim | 0.102 | 0.878 |
Number of reflections | 24465 | 2584 |
<I/σ(I)> | 6.6 | 1 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 4.1 | 4.2 |
CC(1/2) | 0.997 | 0.344 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 290.15 | 0.2M Ammonium acetate, 0.1M HEPES pH 7.5, 25% (w/v) Polyethylene glycol 3,350 |