6DKE
The X-ray crystal structure of Streptococcus pneumoniae Fatty Acid Kinase (Fak) B1 protein loaded with palmitic acid (C16:0) to 1.76 Angstrom resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 46.825, 62.337, 50.430 |
Unit cell angles | 90.00, 95.94, 90.00 |
Refinement procedure
Resolution | 46.574 - 1.760 |
R-factor | 0.1714 |
Rwork | 0.170 |
R-free | 0.20620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.751 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 62.340 | 1.790 |
High resolution limit [Å] | 1.760 | 1.760 |
Rmerge | 0.059 | 0.497 |
Rmeas | 0.072 | 0.613 |
Rpim | 0.042 | 0.355 |
Number of reflections | 28063 | 1592 |
<I/σ(I)> | 10.6 | 2 |
Completeness [%] | 97.9 | 98.7 |
Redundancy | 2.7 | 2.8 |
CC(1/2) | 0.995 | 0.746 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1M MES pH6.5, 30% (w/v) PEG4000 |