6DHW
Crystal structure of primase iron-sulfur domain (266-457)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-22 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.0781 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 110.193, 52.560, 88.774 |
Unit cell angles | 90.00, 115.08, 90.00 |
Refinement procedure
Resolution | 37.197 - 2.013 |
R-factor | 0.1821 |
Rwork | 0.181 |
R-free | 0.21130 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3l9q |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.080 |
High resolution limit [Å] | 2.010 | 4.330 | 2.010 |
Rmerge | 0.117 | 0.060 | 0.648 |
Rmeas | 0.138 | 0.070 | 0.771 |
Rpim | 0.072 | 0.036 | 0.414 |
Total number of observations | 99449 | ||
Number of reflections | 27613 | 3108 | 2609 |
<I/σ(I)> | 8.1 | ||
Completeness [%] | 90.0 | 98.5 | 86 |
Redundancy | 3.6 | 3.7 | 3.3 |
CC(1/2) | 0.994 | 0.390 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 289 | 100 mM TRIS-HCl pH 8.5, 400 mM LiSO4, 18% PEG3350 |