6DDO
Crystal structure of the single mutant (D52N) of the full-length NT5C2 in the basal state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-06-14 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 122.103, 173.142, 123.265 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.051 - 2.480 |
R-factor | 0.1915 |
Rwork | 0.188 |
R-free | 0.22650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ddk |
RMSD bond length | 0.002 |
RMSD bond angle | 0.463 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | COMO |
Refinement software | PHENIX ((1.12_2829)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.051 | 2.530 |
High resolution limit [Å] | 2.480 | 2.480 |
Rmerge | 0.120 | 0.510 |
Rmeas | 0.130 | 0.510 |
Rpim | 0.050 | 0.200 |
Number of reflections | 46552 | 3088 |
<I/σ(I)> | 19.7 | 2.4 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.4 | 7.5 |
CC(1/2) | 0.960 | 0.980 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 7.5 | 293 | 100 mM HEPES (pH 7.5), 10% (w/v) PEG 3350, and 200 mM L-proline |