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6D2V

Apo Structure of TerB, an NADP Dependent Oxidoreductase in the Terfestatin Biosynthesis Pathway

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2017-12-07
DetectorRAYONIX MX-300
Wavelength(s)0.9787
Spacegroup nameP 21 21 21
Unit cell lengths58.516, 80.598, 139.518
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.716 - 1.901
R-factor0.1632
Rwork0.161
R-free0.19780
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.005
RMSD bond angle0.853
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.12_2829))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.34647.3462.020
High resolution limit [Å]1.9005.6701.900
Rmerge0.0830.0250.716
Rmeas0.0890.0270.769
Total number of observations387913
Number of reflections5260921468373
<I/σ(I)>18.5156.633.14
Completeness [%]99.798.799.3
Redundancy7.3746.7747.348
CC(1/2)0.9991.0000.919
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72980.1 M Potassium thiocyanate, 30% w/v PEG Monomethyl ether 2000, 50 mM NaCl, 10 mM HEPES buffer pH 7.0

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