6CWQ
X-ray crystal structure of Flavobacterium johnsoniae dimanganese(II) ribonucleotide reductase beta subunit (as-isolated)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-12 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 |
Unit cell lengths | 48.356, 50.816, 79.285 |
Unit cell angles | 106.15, 105.03, 95.75 |
Refinement procedure
Resolution | 72.630 - 1.900 |
R-factor | 0.193 |
Rwork | 0.192 |
R-free | 0.21170 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.980 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 72.630 | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.056 | 0.023 | 0.500 |
Rmeas | 0.066 | 0.027 | 0.592 |
Rpim | 0.035 | 0.014 | 0.313 |
Total number of observations | 175305 | ||
Number of reflections | 51916 | 2618 | 2632 |
<I/σ(I)> | 8.8 | ||
Completeness [%] | 96.0 | 96.9 | 94.9 |
Redundancy | 3.4 | 3.4 | 3.3 |
CC(1/2) | 0.999 | 0.805 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 277 | 20% PEG 3350, 100 mM magnesium formate |