6CWO
X-ray crystal structure of Flavobacterium johnsoniae dimanganese(II) ribonucleotide reductase beta subunit (aerobic)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-04-18 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 31 |
Unit cell lengths | 53.690, 53.690, 221.845 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 73.950 - 1.870 |
R-factor | 0.2086 |
Rwork | 0.207 |
R-free | 0.23320 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.299 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 73.950 | 50.000 | 1.900 |
High resolution limit [Å] | 1.870 | 5.070 | 1.870 |
Rmerge | 0.065 | 0.029 | 0.834 |
Rmeas | 0.072 | 0.032 | 0.939 |
Rpim | 0.030 | 0.013 | 0.426 |
Number of reflections | 59093 | 2970 | 2964 |
<I/σ(I)> | 9.7 | ||
Completeness [%] | 100.0 | 99.9 | 99.7 |
Redundancy | 5.7 | 5.8 | 4.7 |
CC(1/2) | 0.999 | 0.673 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.2 M magnesium acetate, 20% (w/v) PEG 3350 |