6CWN
Crystal structure of SpaA-SLH/G109A in complex with 4,6-Pyr-beta-D-ManNAcOMe
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-03-31 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 93.383, 36.254, 56.896 |
Unit cell angles | 90.00, 103.74, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.530 |
R-factor | 0.1146 |
Rwork | 0.113 |
R-free | 0.15130 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.021 |
RMSD bond angle | 2.048 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.560 |
High resolution limit [Å] | 1.530 | 4.150 | 1.530 |
Rmerge | 0.044 | 0.036 | 0.155 |
Rmeas | 0.049 | 0.040 | 0.184 |
Rpim | 0.021 | 0.017 | 0.097 |
Total number of observations | 119834 | ||
Number of reflections | 27852 | ||
<I/σ(I)> | 23.5 | ||
Completeness [%] | 98.6 | 96.5 | 84.8 |
Redundancy | 4.3 | 5.3 | 3.4 |
CC(1/2) | 0.998 | 0.962 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 0.1 M potassium thiocyanate, pH 6.8, 30% PEG2000 MME |