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6CNQ

MBD2 in complex with methylated DNA

Replaces:  6C2E
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2013-06-19
DetectorADSC QUANTUM 315
Wavelength(s)0.97918
Spacegroup nameP 31
Unit cell lengths40.500, 40.500, 202.896
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution24.344 - 2.151
R-factor0.2065
Rwork0.206
R-free0.22880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)earlier version of PDB entry 6C2K unpublished DNA model
Data reduction softwareXDS
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.58040.5802.220
High resolution limit [Å]2.1508.8702.150
Rmerge0.0490.0240.864
Rmeas0.0550.0270.951
Rpim0.0230.0120.397
Total number of observations114295
Number of reflections202661732
<I/σ(I)>18.1
Completeness [%]99.991100
Redundancy5.655.8
CC(1/2)0.9990.9980.771
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION29120% PEG-3350, 0.2M ammonium formate

246031

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