6CKM
N. meningitidis CMP-sialic acid synthetase in the presence of CMP-sialic acid and Ca2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL7-1 |
Synchrotron site | SSRL |
Beamline | BL7-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-03-27 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.12709 |
Spacegroup name | C 2 2 2 |
Unit cell lengths | 93.372, 156.020, 38.714 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.005 - 1.543 |
R-factor | 0.154 |
Rwork | 0.153 |
R-free | 0.17630 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1eyr |
RMSD bond length | 0.006 |
RMSD bond angle | 0.763 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.130 | 1.580 |
High resolution limit [Å] | 1.540 | 1.540 |
Rmerge | 0.061 | 0.449 |
Number of reflections | 41624 | 2739 |
<I/σ(I)> | 11.86 | 2.52 |
Completeness [%] | 98.6 | 89.4 |
Redundancy | 3.5 | 3.39 |
CC(1/2) | 0.997 | 0.798 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.16M calcium acetate, 0.08M sodium cacodylate pH 6.5, 14.4% PEG 8000, and 20% glycerol |