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6CCT

Fragment of GID4 in complex with a short peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2017-06-12
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97918
Spacegroup nameP 41 21 2
Unit cell lengths40.140, 40.140, 203.343
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.300 - 2.400
R-factor0.2219
Rwork0.218
R-free0.25960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)early version of model from PDB entry 6CCR
RMSD bond length0.014
RMSD bond angle1.638
Data scaling softwareAimless (0.5.32)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]101.670101.6702.160
High resolution limit [Å]2.1008.9102.100
Rmerge0.0510.0401.050
Rmeas0.0530.0421.102
Rpim0.0160.0130.326
Total number of observations12539117459110
Number of reflections10614827
<I/σ(I)>22.450.21.8
Completeness [%]100.099.7100
Redundancy11.88.611
CC(1/2)0.9990.9980.921
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29120% PEG3350, 2% Tacsimate pH 7.0 and 0.1M HEPES pH 7.5

246031

PDB entries from 2025-12-10

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