6CAQ
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 400.970, 400.970, 175.050 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.908 - 3.400 |
R-factor | 0.1899 |
Rwork | 0.190 |
R-free | 0.21990 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.839 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.908 | 39.908 | 3.210 |
High resolution limit [Å] | 3.130 | 13.980 | 3.130 |
Rmerge | 2.439 | 0.093 | 14.212 |
Rmeas | 2.455 | 0.094 | 14.369 |
Total number of observations | 18868280 | ||
Number of reflections | 242707 | 2893 | 12722 |
<I/σ(I)> | 8.45 | 59.44 | 0.33 |
Completeness [%] | 97.4 | 93.3 | 69.7 |
Redundancy | 77.741 | 66.248 | 41.749 |
CC(1/2) | 0.865 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6.5 | 298 | 17% MPD |