6C9S
Mycobacterium tuberculosis adenosine kinase bound to (2R,3R,4S,5R)-2-(6-([1,1'-biphenyl]-4-ylethynyl)-9H-purin-9-yl)-5-(hydroxymethyl)tetrahydrofuran-3,4-diol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-24 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 41 |
Unit cell lengths | 49.910, 49.910, 264.377 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.290 - 2.230 |
R-factor | 0.201 |
Rwork | 0.199 |
R-free | 0.23500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2pkm |
RMSD bond length | 0.008 |
RMSD bond angle | 0.712 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.290 | 2.310 |
High resolution limit [Å] | 2.230 | 2.230 |
Rmerge | 0.060 | 0.167 |
Number of reflections | 31259 | |
<I/σ(I)> | 26.43 | 10.31 |
Completeness [%] | 98.9 | 98.3 |
Redundancy | 6.9 | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 290 | 100 mM Bis-Tris, pH 6.5, 2.0 M ammonium sulfate, 2% PEG400 |