6C8J
RNA-activated 2-AIpG monomer complex, 15 min soaking
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.1 |
Synchrotron site | ALS |
Beamline | 8.2.1 |
Temperature [K] | 99 |
Detector technology | CCD |
Collection date | 2017-07-09 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 1 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 49.091, 49.091, 81.097 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 1.500 |
R-factor | 0.21261 |
Rwork | 0.211 |
R-free | 0.24415 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5dhc |
RMSD bond length | 0.030 |
RMSD bond angle | 3.237 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.550 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.110 | 0.553 |
Rmeas | 0.116 | 0.586 |
Rpim | 0.036 | 0.189 |
Number of reflections | 16980 | 1761 |
<I/σ(I)> | 12.41 | 3.76 |
Completeness [%] | 90.1 | 95.7 |
Redundancy | 10.6 | 9.1 |
CC(1/2) | 0.981 | 0.918 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 10% v/v (+/-)-2-Methyl-2,4-pentanediol, 0.040 M Sodium cacodylate trihydrate pH 7.0, 0.012 M Spermine tetrahydrochloride, 0.080 M Sodium chloride, 0.020 M Magnesium chloride hexahydrate |