6C4T
Staphylopine dehydrogenase (SaODH) - NADP+ bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97937 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 186.096, 49.258, 59.106 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.580 - 2.490 |
R-factor | 0.224 |
Rwork | 0.219 |
R-free | 0.26590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6c4l |
RMSD bond length | 0.015 |
RMSD bond angle | 1.290 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.580 | 2.590 |
High resolution limit [Å] | 2.490 | 2.490 |
Rmerge | 0.090 | 0.889 |
Number of reflections | 19677 | 2121 |
<I/σ(I)> | 12.2 | |
Completeness [%] | 99.5 | |
Redundancy | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 100 mM Tris pH 8.0, 100 mM lithium sulfate, 23% (w/v) PEG 3350 |