6BXG
1.45 Angstrom Resolution Crystal Structure of PDZ domain of Carboxy-Terminal Protease from Vibrio cholerae in Complex with Peptide.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-08-08 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 65 |
Unit cell lengths | 35.579, 35.579, 118.394 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.820 - 1.450 |
R-factor | 0.1346 |
Rwork | 0.132 |
R-free | 0.17758 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.414 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.480 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.054 | 0.759 |
Rmeas | 0.058 | 0.817 |
Rpim | 0.021 | 0.300 |
Number of reflections | 15127 | 775 |
<I/σ(I)> | 51.2 | 2.9 |
Completeness [%] | 99.9 | 100 |
Redundancy | 7.4 | 7.3 |
CC(1/2) | 0.893 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.3 | 292 | Protein: 9.7 mg/ml, 0.5M Sodium chloride, 0.01M Tris pH 8.3; Screen: PACT (E3) 0.2M Sodium iodide, 20% (w/v) PEG 3350.. |