6BW6
Human GPT (DPAGT1) H129 variant in complex with tunicamycin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-31 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 210.615, 105.363, 148.080 |
Unit cell angles | 90.00, 103.49, 90.00 |
Refinement procedure
Resolution | 94.509 - 2.950 |
R-factor | 0.2614 |
Rwork | 0.260 |
R-free | 0.29080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5lev |
RMSD bond length | 0.003 |
RMSD bond angle | 0.576 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 3.055 |
High resolution limit [Å] | 2.950 | 2.950 |
Rpim | 0.079 | |
Number of reflections | 36769 | 6360 |
<I/σ(I)> | 17.51 | |
Completeness [%] | 92.6 | 54.7 |
Redundancy | 112.4 | 112.8 |
CC(1/2) | 0.840 | 0.763 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 290 | PEG400, calcium chloride |