6BVP
Crystal structure of 3-hydroxyanthranilate-3,4-dioxygenase N27A from Cupriavidus metallidurans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 58.405, 58.405, 230.507 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.248 - 1.903 |
R-factor | 0.1963 |
Rwork | 0.192 |
R-free | 0.23200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yfu |
RMSD bond length | 0.007 |
RMSD bond angle | 0.830 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.970 |
High resolution limit [Å] | 1.900 | 4.090 | 1.900 |
Rmerge | 0.158 | 0.127 | 0.656 |
Rmeas | 0.167 | 0.134 | 0.717 |
Rpim | 0.051 | 0.041 | 0.276 |
Number of reflections | 19292 | 2182 | 1816 |
<I/σ(I)> | 5.8 | ||
Completeness [%] | 99.4 | 98.9 | 97.3 |
Redundancy | 10.3 | 10.7 | 5.7 |
CC(1/2) | 0.982 | 0.874 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | PEG 8000 15%, 0.1M Tris-HCl, 0.2 M MgCl2, pH 8.5 |