6BSB
Crystal structure of the Mucin-1 SEA domain, L1105M mutant, Selenium-derivative
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-24 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.9791 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 43.700, 43.700, 79.490 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.147 - 1.600 |
R-factor | 0.177 |
Rwork | 0.175 |
R-free | 0.22170 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 0.892 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELXDE |
Refinement software | PHENIX (dev_2306) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 1.700 |
High resolution limit [Å] | 1.600 | 15.000 | 1.600 |
Rmerge | 0.054 | 0.031 | 0.492 |
Rmeas | 0.058 | 0.033 | 0.577 |
Number of reflections | 22032 | 13 | 3347 |
<I/σ(I)> | 20.22 | 60.43 | 2.19 |
Completeness [%] | 98.2 | 100 | 89.6 |
Redundancy | 6.832 | 7.077 | 3.669 |
CC(1/2) | 0.999 | 0.999 | 0.753 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | Native crystals (see related entry) were used as seeds in a drop of 1:1 mix of the SeMet-derivative (9 mg/ml in 10 mM Tris-Cl, pH 7.4) and reservoir solution (0.1 M sodium acetate trihydrate pH 4.6, 1.75 M sodium chloride, 0.2 M ammonium sulfate). |