6BRB
Novel non-antibody protein scaffold targeting CD40L
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-12-15 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 93.528, 93.528, 66.685 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 51.480 - 2.820 |
R-factor | 0.22988 |
Rwork | 0.225 |
R-free | 0.27321 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 1ALY & 1TEN |
RMSD bond length | 0.007 |
RMSD bond angle | 1.271 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.480 | 2.830 |
High resolution limit [Å] | 2.820 | 2.820 |
Rmerge | 0.195 | 0.796 |
Rmeas | 0.208 | |
Rpim | 0.073 | 0.349 |
Number of reflections | 8406 | 549 |
<I/σ(I)> | 8.1 | |
Completeness [%] | 99.9 | |
Redundancy | 7.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 40% v/v PEG600, 0.1 M sodium acetate, 0.2 M magnesium chloride |