6BQY
Crystal Structure of Tyrosine-tRNA Synthetase from Acinetobacter baumannii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-10-11 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 1 |
Unit cell lengths | 53.370, 56.620, 64.070 |
Unit cell angles | 87.95, 113.85, 109.52 |
Refinement procedure
Resolution | 31.159 - 2.100 |
R-factor | 0.1901 |
Rwork | 0.188 |
R-free | 0.22600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hse |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MR-Rosetta |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 31.159 | 31.159 | 2.150 |
High resolution limit [Å] | 2.100 | 9.390 | 2.100 |
Rmerge | 0.047 | 0.031 | 0.599 |
Rmeas | 0.055 | 0.037 | 0.692 |
Total number of observations | 143863 | ||
Number of reflections | 36717 | 393 | 2668 |
<I/σ(I)> | 12.85 | 32.8 | 2.35 |
Completeness [%] | 97.8 | 94.5 | 96.7 |
Redundancy | 3.918 | 3.491 | 3.983 |
CC(1/2) | 0.999 | 0.998 | 0.939 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 290 | 20.0 mg/mL AcbaC.01032.a.B2.PW38226, 1:1 with MCSG1(g1) (0.1 M HEPES:NaOH, pH 7.5, 10% w/v PEG8000, 8% v/v ethylene glycol), cryoprotectant: 20% ethylene glycol, Tray: 291063g1, puck: ikf2-10 |