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6BH3

LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR (S)-N-(1-(3-isopropyl-1H-pyrazole-5-carbonyl)pyrrolidin-3-yl)cyclopropanecarboxamide (Compound N55)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2016-07-02
DetectorRAYONIX MX300-HS
Wavelength(s)1.00000
Spacegroup nameC 1 2 1
Unit cell lengths116.667, 62.325, 46.872
Unit cell angles90.00, 92.58, 90.00
Refinement procedure
Resolution32.969 - 1.701
R-factor0.1958
Rwork0.195
R-free0.21570
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5e6h
RMSD bond length0.002
RMSD bond angle0.490
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (dev_2863)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.9801.760
High resolution limit [Å]1.7001.700
Rmerge0.1060.924
Rpim0.0480.603
Number of reflections356862696
<I/σ(I)>222
Completeness [%]96.773.8
Redundancy5.32.4
CC(1/2)0.568
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2891.2-1.35 M (NH4)2SO4, 0.1 M Tris-HCl (pH 8.6-9.2), 0-20% glycerol, 25 mM (Na/K) dibasic/monobasic phosphate

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