6BGV

LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR 2-((2-chlorophenyl)(2-(piperidin-1-yl)ethoxy)methyl)-1l2-pyrrolo[3,2-b]pyridine-7-carboxylic acid (Compound N40)

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	APS BEAMLINE 22-ID
Synchrotron site	APS
Beamline	22-ID
Temperature [K]	100
Detector technology	CCD
Collection date	2015-12-11
Detector	RAYONIX MX300-HS
Wavelength(s)	1.000000
Spacegroup name	C 1 2 1
Unit cell lengths	116.289, 61.883, 46.735
Unit cell angles	90.00, 92.32, 90.00

Refinement procedure

Resolution	30.942 - 1.592
R-factor	0.1685
Rwork	0.168
R-free	0.18400
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	5e6h
RMSD bond length	0.002
RMSD bond angle	0.554
Data reduction software	HKL-2000
Data scaling software	HKL-2000
Phasing software	PHENIX
Refinement software	PHENIX (dev_2863)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	30.942	1.650
High resolution limit [Å]	1.590	1.590
Rmerge	0.155	0.743
Rpim	0.061	0.408
Number of reflections	43550	4247
<I/σ(I)>	15	3.2
Completeness [%]	98.4	96.1
Redundancy	6.8	3.4
CC(1/2)		0.645

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP		289	1.2-1.35 M (NH4)2SO4, 0.1 M Tris-HCl (pH 8.6-9.2), 0-20% glycerol, 25 mM (Na/K) dibasic/monobasic phosphate