6BEI
Crystal structure of VACV D13 in its apo (unbound) form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-08-02 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.953700 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 190.820, 190.820, 254.240 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.940 - 2.810 |
R-factor | 0.2 |
Rwork | 0.198 |
R-free | 0.23100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 3SAM |
RMSD bond length | 0.007 |
RMSD bond angle | 0.970 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | BUSTER |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.940 | 19.940 | 2.880 |
High resolution limit [Å] | 2.810 | 12.550 | 2.810 |
Rmerge | 0.200 | 0.029 | 1.788 |
Rmeas | 0.207 | 0.030 | 1.850 |
Number of reflections | 66970 | 813 | 4792 |
<I/σ(I)> | 17.17 | 68.98 | 1.79 |
Completeness [%] | 99.8 | 90.6 | 98.4 |
Redundancy | 15.432 | 12.768 | 15.371 |
CC(1/2) | 0.996 | 1.000 | 0.561 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 293 | 3.5-4.0 M sodium formate and 0.1 M citric acid |